Global retrieval of canopy chlorophyll content from Sentinel-3 OLCI TOA data using a two-step upscaling method integrating physical and machine learning models

Abstract

Canopy chlorophyll content per ground area (CCC, g·m−2) is tightly related to vegetation photosynthesis and is a promising indicator of photosynthetic capacity. However, a global operational CCC product is not yet available. To fill this gap, we developed a two-step upscaling method to estimate global CCC from Sentinel-3 OLCI top-of-atmosphere (TOA) reflectance. In the first step, a physically-based PROSAIL-D inversion model produced accurate CCC maps from over 20,000 high-spatial resolution (1 m) airborne hyperspectral images collected across 50 sites within the National Ecological Observatory Network (NEON) between 2019 and 2021. The validation against ground CCC measurements showed an R2 of 0.89 and an RMSE of 0.30 g·m−2. In the second step, these high-resolution CCC maps were resampled or upscaled to a spatial resolution of 300 m, and combined with Sentinel-3 OLCI TOA reflectance images to train random forest (RF) models. The RF model demonstrated robust performance with leave-one-site-out cross-validation, yielding an R2 of 0.92 and RMSE of 0.14 g·m−2. The two-step method also showed minimal sensitivity to angular effects and land cover variations, underscoring its robustness. In comparison, the traditional direct inversion method (the one-step method) led to underestimation of CCC by 0.16 g·m−2 and a moderate estimation accuracy (R2 = 0.65, RMSE = 0.30 g·m−2). We generated a long-term global OLCI CCC product using Sentinel-3 OLCI TOA reflectance data from 2016 to 2024, which can also be continuously updated using current data. This global CCC product can provide important plant physiological information, for parameterizing terrestrial biosphere models and capturing spatiotemporal photosynthetic patterns, thereby advancing research on vegetation carbon dynamics cycles at the global scale.

Dr. Dong Li

Research Scientist

My research interests include vegetation remote sensing and precision agriculture.

Dr. Anirudh Belwalkar

Postdoctoral Researcher

My research interests include hyperspectral remote sensing of vegetation and precision agriculture.

Prof. Dr. Kang Yu

Professor of Precision Agriculture

My research interests include precision crop farming, hyperspectral remote sensing, and AI in agriculture.